Berkeley Engineering

Spring 2002

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From the dean

Features

News Briefs

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Prominent scientist heads new research center

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Microchip seeks out prostate cancer

> Technology venture helps Merced students
> Will printed circuits replace barcodes on tomorrow's
soup cans?
>
> Revisiting shaken-baby syndrome
>

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Microchip seeks out prostate cancer

By Robert Sanders

A clever technique for detecting proteins by inducing them to stick to and bend a microscopic cantilever -- essentially a diving board the thickness of a human hair -- is sensitive enough to serve as a diagnostic test for the protein markers characteristic of prostate cancer, a team of scientists from universities and research laboratories across the country reported in a recent issue of the journal Nature Biotechnology.

Three cantilevers coated with antibodies to PSA, a prostate cancer marker found in the blood. The left cantilever bends as the protein PSA binds to the antibody. Although Majumdar and his team did not conduct the current experiment with three adjacent cantilevers, the illustration represents some of the individual experiments they performed. The group currently is making a chip that can do all three (or more) experiments simultaneously. Photo courtesy of Kenneth Hsu/UC Berkeley & the Protein Data Bank

The protein markers, called PSAs for prostate-specific antigens, are found at elevated levels in the blood of men with prostate cancer, the number two killer of American men.

"The technique is sensitive enough to detect levels 20 times lower than the clinically relevant threshold," says Berkeley mechanical engineering professor Arun Majumdar, a lead author of the report. "This is currently as good as, and potentially better than, the so-called ELISA, enzyme-linked immunosorbent assay, which is the standard today for detecting protein markers like PSA."

The microcantilever technique has far broader applications, however. Any disease, ranging from breast cancer to AIDS, characterized by protein in blood or urine, could conceivably be assayed by arrays of these microcantilevers. A microcantilever array would be one of the first "protein chips," analogous to the DNA chip used broadly today in research labs and the biotech industry to conduct hundreds of DNA analysis simultaneously.

"This could lead to fast screening and molecular profiling for many diseases and a possible chip for detecting cancer," says Majumdar.

"A big advantage of this technology is that one could look at multiple markers in a single reaction, whereas currently available assays require a separate reaction for each analyte," says colleague Richard J. Cote, M.D., professor of pathology and urology at the Keck School of Medicine of the University of Southern California and the USC/ Norris Comprehensive Cancer Center. "So the cost of performing a cantilever assay as opposed to a typical ELISA assay is potentially much, much lower."


FOREFRONT reports on activities in the College of Engineering at the University of California, Berkeley. It features developments of interest to the engineering and scientific communities and to alumni and friends of the College.

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